Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs11000773 | chr10:75534115 | G/T | 0 | 213 | 16.5 | 15.07 | 2.47 | KM Plot |
KIRP | rs11000777 | chr10:75545063 | G/C | 0 | 213 | 16.5 | 15.07 | 2.47 | KM Plot |
KIRP | rs11000780 | chr10:75559077 | G/A | 0 | 213 | 15.88 | 18.03 | 2.47 | KM Plot |
KIRP | rs11000789 | chr10:75595226 | T/G | 0 | 213 | 16.53 | 17.23 | 4.82 | KM Plot |
KIRP | rs11000797 | chr10:75628224 | A/G | 3.75E-6 | 209 | 15.88 | 18.72 | 5.57 | KM Plot |
KIRP | rs11001530 | chr10:77636050 | C/T | 0 | 214 | 2.63 | 13.73 | 16.93 | KM Plot |
KIRP | rs11032966 | chr11:35004623 | C/T | 0 | 213 | 16.43 | 18.15 | 3.83 | KM Plot |
KIRP | rs11044213 | chr12:8393185 | C/T | 0.00033 | 202 | 16.43 | 19.9 | 6.07 | KM Plot |
KIRP | rs11044217 | chr12:8393314 | G/A | 0.00033 | 202 | 16.43 | 19.9 | 6.07 | KM Plot |
KIRP | rs11074412 | chr16:19833001 | A/G | 5.91E-7 | 210 | 14.1 | 19.83 | 12.23 | KM Plot |
KIRP | rs11074418 | chr16:19940498 | C/T | 0.000603 | 209 | 16.47 | 13.97 | 11.43 | KM Plot |
KIRP | rs11119961 | chr1:212708134 | C/T | 2.68E-7 | 214 | 16.45 | 14.92 | 10.63 | KM Plot |
KIRP | rs11119966 | chr1:212715522 | A/G | 3.22E-7 | 214 | 16.43 | 16.53 | 10.63 | KM Plot |
KIRP | rs111237243 | chr14:59991030 | G/T | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs111269237 | chr10:70684952 | C/T | 7.43E-9 | 214 | 14.87 | 18.77 | 9.77 | KM Plot |